FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56214
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT4170.7418080905112605No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT3730.6635357740064752No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA2650.4714128153129114No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC960.17077596328316788No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC830.14765005158857222No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA670.1191873910413776No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN650.11562955847297827No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)