FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17315
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT1580.9125036095870632No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA700.40427375108287616No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC340.19636153624025413No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT330.19058619693907017No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC270.15593416113196648No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA220.12705746462604678No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)