FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782712

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782712
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences173447
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT19021.0965885832559803No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT16140.9305436242771568No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA7990.4606594521669444No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC2820.162585689000098No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC2500.14413624911356207No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA2160.12453371923411762No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1920.11069663931921565No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)