FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782716

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782716
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15455
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2091.3523131672597866No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA2031.3134907796829505No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT1791.1582012293756065No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT930.6017470074409577No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA720.4658686509220317No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC260.1682303461662892No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTTGTGGGGTGGGGGGA170.10999676480103528No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)