FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36924
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT4941.337883219586177No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT3711.004766547502979No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA1850.5010291409381432No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1670.4522803596576752No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1570.4251977033907486No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC610.16520420322825263No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC520.14082981258801863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)