FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159838
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA19251.2043443987036875No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT17451.0917303770067193No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN16201.0135261952727137No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT12420.7770367497090804No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA9410.5887210800935947No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC2680.1676697656377082No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC2650.16579286527609205No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)