FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences338029
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT26780.7922397190773574No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA21990.6505359007659106No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT21600.6389984291288617No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN18540.5484736516689397No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA17750.5251028757887637No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC6330.1872620396474859No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC6090.18016205710160962No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)