FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34472
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT5151.4939661174286376No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA4441.2880018565792528No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN4301.247389185425853No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT1790.5192620097470411No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1460.4235321420283128No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC470.1363425388721281No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC470.1363425388721281No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)