FastQCFastQC Report
Sat 3 Sep 2022
EGAF00000782727

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782727
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences699586
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT94961.3573742184663502No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT50750.7254290394604809No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA41190.5887767908448711No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC12200.17438885283582004No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC11510.16452587673281055No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA7270.10391860328823047No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)