FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences412632
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT38400.9306112952945967No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA23200.5622443242404854No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT18490.4480990325520076No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA17550.42531844355260856No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN15910.3855735861494019No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC7390.17909420500591328No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC6820.1652804435913841No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)