FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159653
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT20151.2621122058464294No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT12370.7748053591225972No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA8710.5455581793013599No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN8120.5086030328274445No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA5930.37143053998358944No Hit
ACCAGCAAGAGGCTTAGACCCAGCTTTCTTGTACAAAGTGGTCCCCGTGA4110.2574333084877829No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC2250.14093064333272784No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC2090.13090890869573388No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)