FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782734

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782734
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129675
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT17381.3402737613263929No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT7090.5467514941199151No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA5570.4295353769037979No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3330.2567958357432042No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA2720.20975515712357817No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC2030.15654520917678813No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC1750.1349527665317139No Hit
ACCAGCAAGAGGCTTAGACCCAGCTTTCTTGTACAAAGTGGTCCCCGTGA1530.11798727588201272No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)