FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782735

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782735
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19548
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT3081.5756087579291997No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA1760.9003478616738286No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1250.639451606302435No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT1100.5627174135461428No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA820.4194802537343974No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC270.13812154696132595No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC210.10742786985880909No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)