FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38895
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA12343.172644298753053No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN11642.992672580023139No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT4971.2777992029823886No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT4161.0695462141663452No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1870.48078159146419847No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCAAGATCGGAAGAGCAC830.21339503792261216No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC470.12083815400437073No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC440.11312508034451729No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCGGGGGGTGGGGGGC430.1105540557912328No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)