FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782737

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782737
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66639
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT8231.235012530200033No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT5680.8523537267966206No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA3280.49220426476987955No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA2670.40066627650474945No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2040.3061270427227299No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC1160.17407223997959154No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC930.13955791653536218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)