FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84161
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT12731.5125770843977613No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA6830.8115397868371337No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN4840.5750882237615997No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT4120.48953790948301473No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA2040.24239255712265778No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC1360.16159503808177184No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC1200.14258385713097516No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)