FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37186
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT4071.0944979293282417No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT3290.8847415694078418No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA2170.5835529500349594No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1850.49749905878556444No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1160.31194535577905663No Hit
ACCAGCAAGAGGCTTAGACCCAGCTTTCTTGTACAAAGTGGTCCCCGTGA970.2608508578497284No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC640.17210778249878986No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC560.15059430968644114No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)