FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95109
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT10061.0577337581091169No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT9230.9704654659390805No Hit
TCCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT4570.4805013195386346No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA3110.32699323933591984No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2780.2922962075092788No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1980.20818219095984605No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC1300.13668527689282825No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC1250.1314281508584887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)