FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49720
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA11222.256637168141593No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN9441.8986323411102173No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT4960.997586484312148No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1520.30571198712791636No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT1440.28962188254223653No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCAAGATCGGAAGAGCAC800.16090104585679807No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)