FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90237
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT10311.1425468488535744No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT8790.9741015326307392No Hit
TCCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT5740.6361027073151811No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3190.35351352549397697No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA3020.3346742467058967No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA2280.25266797433425314No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC1400.15514700178419052No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC1340.1484978445648681No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)