FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111731
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT11921.066848054702813No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT6960.6229247030815083No Hit
TCCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT4050.36247773670691213No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA2890.2586569528599941No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA2340.20943158120843813No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2190.1960064798489229No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC1790.16020620955688214No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC1520.1360410271097547No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)