FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38366
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT3570.9305113902934891No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT2290.5968826565187927No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA920.23979565240056297No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC550.14335609654381484No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC530.1381431475785852No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA510.1329301986133556No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)