FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153383
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT14920.972728398844722No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT10420.679345168630161No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA5100.3325009942431691No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC2630.1714661989920656No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC2380.15516713064681223No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2090.1362602113663183No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA2000.13039254676202708No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)