FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782751

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782751
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41541
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT5241.2614043956573024No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT3490.8401338436725162No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1280.30812931802315785No Hit
TCCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT1260.303314797429046No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA1230.29609301653787823No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1000.24072602970559207No Hit
ACCAGCAAGAGGCTTAGACCCAGCTTTCTTGTACAAAGTGGTCCCCGTGA610.14684287812041116No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC590.1420283575262993No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC580.1396210972292434No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)