FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782752

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782752
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31078
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA7742.4905077546817687No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN7342.361799343587103No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT4031.2967372417787502No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT3561.145504858742519No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1460.46978570049552737No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC580.1866271960872643No Hit
ACCAGCAAGAGGCTTAGACCCAGCTTTCTTGTACAAAGTGGTCCCCGTGA550.17697406525516443No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCAAGATCGGAAGAGCAC470.1512323830362314No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC410.13192612137203166No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)