FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32291
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT4681.4493202440308444No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT3571.1055712117927596No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA3080.9538261435074789No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2790.8640178377876189No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1410.43665417608621593No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC610.18890712582453315No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC420.13006720138738348No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)