FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782763

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782763
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106375
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCTGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT6629662.322914218566396No Hit
TCACTGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT16051.508813160987074No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGCGGTATCCACATCCTCTTCCT9930.9334900117508813No Hit
TCCCTGTTCCCACTCATACAGGCCTTGGGAGGTATCCACATCCTCTTCCT6780.6373678025851939No Hit
TCCCTGTTCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCTC5860.5508813160987074No Hit
TCCCTGTTCACACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT5410.508578143360752No Hit
TCCTGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCTC5240.4925969447708578No Hit
TCCCTGTTCCCACTAATACAGGACTTGGGAGGTATCCACATCCTCTTCCT4930.463454759106933No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGGCATCCACATCCTCTTCCT4380.4117508813160987No Hit
TACCTGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT4360.4098707403055229No Hit
TCCCTGTTCTCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT3430.3224441833137485No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGGTCTCCACATCCTCTTCCT3360.31586368977673324No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGTGGTATCCACATCCTCTTCCT3320.31210340775558165No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGGTATCAACATCCTCTTCCT3260.3064629847238543No Hit
TCCCTGTTCCCACTCTTACAGGACTTGGGAGGTATCCACATCCTCTTCCT3110.29236192714453585No Hit
TCCCTGATCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT3000.282021151586369No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGGTATACACATCCTCTTCCT2930.2754406580493537No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGGAATCCACATCCTCTTCCT2890.2716803760282021No Hit
TCCCTGTTCCCACTCATACAGGAATTGGGAGGTATCCACATCCTCTTCCT2620.2462984723854289No Hit
TCTCTGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT2520.23689776733254994No Hit
TCCCTGTTCCCAATCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT2410.2265569917743831No Hit
TCCCTGTTCCCACTCATACAGGGCTTGGGAGGTATCCACATCCTCTTCCT2280.2143360752056404No Hit
CCCTGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCTC2250.21151586368977673No Hit
TCCCTGTTGCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT2140.20117508813160986No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2140.20117508813160986No Hit
TCCCTTTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT2120.19929494712103407No Hit
TCCCTGTTCCCACTCATCCAGGACTTGGGAGGTATCCACATCCTCTTCCT2100.1974148061104583No Hit
TCCCTGTTCCCCCTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT2020.1898942420681551No Hit
TCCCTGTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCTC2010.18895417156286723No Hit
TCCCTGTTACCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1950.18331374853113983No Hit
TCCCTGTTCCCACTCATAAAGGACTTGGGAGGTATCCACATCCTCTTCCT1940.18237367802585194No Hit
TCCCTGTTCCAACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1910.17955346650998824No Hit
TCCCTGTTCCCACTCATACGGGACTTGGGAGGTATCCACATCCTCTTCCT1800.1692126909518214No Hit
TCCCGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCTC1790.1682726204465335No Hit
TCCCTGTTCCCACTCATTCAGGACTTGGGAGGTATCCACATCCTCTTCCT1790.1682726204465335No Hit
TCCTTGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1780.16733254994124558No Hit
TCCCTGTTCCCACTCATCAGGACTTGGGAGGTATCCACATCCTCTTCCTC1760.1654524089306698No Hit
TCCCTGTTCCCGCTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1740.16357226792009402No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGGGGTATCCACATCCTCTTCCT1700.1598119858989424No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCCCTTCCT1690.15887191539365453No Hit
TCCCTGTTCCCACTCATACAGAACTTGGGAGGTATCCACATCCTCTTCCT1630.15323149236192715No Hit
TCCCGGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1490.14007050528789658No Hit
TCCCTGTTCCCACTCATACCGGACTTGGGAGGTATCCACATCCTCTTCCT1490.14007050528789658No Hit
TCCCTGTTCCCACTATACAGGACTTGGGAGGTATCCACATCCTCTTCCTC1490.14007050528789658No Hit
TCCCTGTTCCCCTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCTC1430.1344300822561692No Hit
TCCCTTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCTC1410.1325499412455934No Hit
TCCCTGTTCCCACTCATACAGTACTTGGGAGGTATCCACATCCTCTTCCT1390.13066980023501762No Hit
TCCCTGTTCCCACTCTACAGGACTTGGGAGGTATCCACATCCTCTTCCTC1340.12596944770857815No Hit
TCCCAGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1330.12502937720329024No Hit
TCCCTGCTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1300.12220916568742655No Hit
TCCCTGTTCCCACACATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1290.12126909518213867No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCCTCCT1280.12032902467685076No Hit
TCCCTGTTCCCACGCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1280.12032902467685076No Hit
TCCCTGTTCCCATCATACAGGACTTGGGAGGTATCCACATCCTCTTCCTC1270.11938895417156285No Hit
TCCCTGTTCCCACCATACAGGACTTGGGAGGTATCCACATCCTCTTCCTC1270.11938895417156285No Hit
TCCCTGTTCCCACTCCTACAGGACTTGGGAGGTATCCACATCCTCTTCCT1220.11468860164512337No Hit
TCCCTGTTCCTACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1200.1128084606345476No Hit
TCCCTGTTCCCACCCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1200.1128084606345476No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGGTATCCACACCCTCTTCCT1170.10998824911868389No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGGGATCCACATCCTCTTCCT1170.10998824911868389No Hit
TTCCTGTTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1090.10246768507638072No Hit
TCCCTATTCCCACTCATACAGGACTTGGGAGGTATCCACATCCTCTTCCT1090.10246768507638072No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGGTACCCACATCCTCTTCCT1090.10246768507638072No Hit
TCCCTGTTCCCACTCATACAGGACTTGGGAGTTATCCACATCCTCTTCCT1070.10058754406580493No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)