FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782764

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782764
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86141
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT7051881.86345642609211No Hit
CCATGGACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT5250.6094658757153968No Hit
CCATGGAACCAGACAGAAAGGCGGCTGTTAGTCACTGGCAGCAACAGTCT4620.5363299706295492No Hit
CCATGGAACAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT4550.5282037589533439No Hit
CCATGGAACCAGCAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT4300.49918157439546795No Hit
CCATGGAACCGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT3420.3970234847517442No Hit
CCATGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAACAACAGTCT3270.37961017401701863No Hit
CCATGGAACCGGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT3170.36800130019386823No Hit
CCATGGAGCCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT3000.3482662146945125No Hit
CCATGGAACCAGAAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT2880.334335566106732No Hit
CATGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT2790.3238875796658966No Hit
CCATGGAACCAGACGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT2760.3204049175189515No Hit
CCATGGAACCAGGCAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT2440.2832565212848701No Hit
CCATGGAACCAACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT2320.2693258726970897No Hit
CCATGGCACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT2260.2623605484031994No Hit
CCATGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT1960.22753392693374816No Hit
CCATGGAACCAGACAGAAAAGCGGCTGTTAGCCACTGGCAGCAACAGTCT1810.21012061619902256No Hit
CCATGGAACTAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT1780.2066379540520774No Hit
CCATGGAACCAGACAGAATAGCGGCTGTTAGTCACTGGCAGCAACAGTCT1770.20547706666976237No Hit
CCATGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGCCT1730.2008335171405022No Hit
CCATGGAACCAGACAGATAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT1700.19735085499355706No Hit
CCATGGAACCAGACAGAAAAGCGGCCGTTAGTCACTGGCAGCAACAGTCT1590.18458109378809162No Hit
CCATGGAACCAGACAGAAAAGCGGCTGTTAGACACTGGCAGCAACAGTCT1580.18342020640577655No Hit
CCTGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT1530.17761576949420135No Hit
CCGTGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT1510.17529399472957127No Hit
CCATGGAACCAGACAAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT1340.15555890923021556No Hit
CCATGGAACCAGACTGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT1340.15555890923021556No Hit
CCATGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGACT1330.15439802184790055No Hit
CCATGGAACCAGACAGAAAAGCGGCTGCTAGTCACTGGCAGCAACAGTCT1280.14859358493632532No Hit
CCATGGAACCAGACAGGAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT1210.14046737326012004No Hit
CCAGGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT1150.13350204896622977No Hit
CCATGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCGGCAACAGTCT1130.1311802742015997No Hit
CCATGGAACCAGATAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT1130.1311802742015997No Hit
CCATGGAACCAGACGGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT1080.1253758372900245No Hit
CCATGGAACCAGACAGAAAAGCGGCTGTTAGTCACCGGCAGCAACAGTCT1040.12073228776076433No Hit
CCATGGAACCAGACAGCAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT1030.1195714003784493No Hit
CCATGGAAGCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT980.11376696346687408No Hit
CCATGGAACCAGACAGTAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT940.1091234139376139No Hit
CCATGGTACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT940.1091234139376139No Hit
CCAGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTT910.10564075179066879No Hit
CCATGGAACCAGACAGAGAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT910.10564075179066879No Hit
TCAAATAAGCAGCAGGAGAAAGCCCCCCTACTGCTCACCCGGAGGGCCAC900.10447986440835373No Hit
CCATGGAACCCGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT880.10215808964372365No Hit
CCATGGAACCAGCCAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCT870.10099720226140863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)