FastQCFastQC Report
Fri 6 Jan 2023
EGAF00000796691

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000796691
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159383712
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGATCCGTATACGTTTCTAATTTGTAGTTAACGGTTGGATACCACTT3504870.21990139117854152No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCAGAAGACCTAAGCTAGC3316120.20805890127593463No Hit
GGGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCAGAAGA3312560.20783554093657952No Hit
AGTATGGCCCGGGGGATCCGTATACGTTTCTAATTTGTAGTTAACGGTTG3300280.20706507324914103No Hit
ACTGGATGCATCTGCAGGATATCGCGGCCGCAGAAGACCTAAGCTAGCGT2779750.17440615261865652No Hit
ACTAGTATGGCCCGGGGGATCCGTATACGTTTCTAATTTGTAGTTAACGG2750970.17260044740330804No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)