FastQCFastQC Report
Sun 4 Sep 2022
EGAF00000818678

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000818678
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences896577
Sequences flagged as poor quality0
Sequence length100
%GC27

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN15030.16763758160202635No Hit
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN10450.11655440637000504No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)