FastQCFastQC Report
Fri 10 May 2024
EGAF00000828839

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000828839
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences318210599
Total Bases39.7 Gbp
Sequences flagged as poor quality0
Sequence length125
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN41779031.3129364682161324No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)