FastQCFastQC Report
Wed 31 Aug 2022
EGAF00000853973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000853973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length43
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGAGAGAATCCACAGACCCTCTGAAGGAACTGGATCGCCACT212.5No Hit
TAAAGGAATTTTTTTCCTGGCTGAACATATACATTTGAATTCA16.25No Hit
CTGTCTAAAAATTAATAATAATAAAATAAAAATAAAATAAAAT16.25No Hit
CTATCATCTTTTCAGCTAGTGAATGTGCTTCTTTTTTTAAAAA16.25No Hit
CCGTTCACTCTTTAATGTGTTGTGATCTAGTACTGACACTGTT16.25No Hit
GTTCACTTTGACTTCAGCCTCAAAGCTTGACTGGCTGTGACAG16.25No Hit
ATTCATATTCTTGCATTTTTAAGTAGAACTTTTTATATTTTAA16.25No Hit
AAGAAAAGAAAAAAGAAGGAGGGCAGGATGTTTCAAAGAGGAC16.25No Hit
TCCCAGATTTCATGTCCTTCTCACATTTCAAAATACAATTATC16.25No Hit
GATTTTATTTTTGGATTTTTCATTGACAGTATATAGAAAAAGG16.25No Hit
AGTATACACTTGTAGTCCCAGCTACTGGGGAGACTGAGGTGGG16.25No Hit
ATTGTTTCGGTTCACCAGTCAGGATTATTAATGATAACCATAG16.25No Hit
AGGCATCCTGCAGTATTGCCAAGAAGTAAGTCCTGTCCGGTGG16.25No Hit
GTAAATCTGCATAAACATGTTGTTATTGCACTTATTTCTAAAT16.25No Hit
TAAACAAAGGTTTCATTATTCTCCACAGTGTCCTTTTTTTTAC16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)