FastQCFastQC Report
Sun 4 Sep 2022
EGAF00000859598

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000859598
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1684261
Sequences flagged as poor quality0
Sequence length71-85
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAA29010.1722417131311596No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT26020.15448912015418037No Hit
GACGGCAGTTGCAGCCAAGCAACGCCAGAAAGCCGGCTTCACGCTCAGGA20690.1228431935430435No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG17410.10336877716695927No Hit
CTCCCCAATACGGAGAGAAGAACGATCATCAATGGCTGACGGCAGTTGCA17130.10170632698851306No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)