FastQCFastQC Report
Thu 9 May 2024
EGAF00000883827

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000883827
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences65545183
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length36
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
....................................1118720.17067920918002472No Hit
ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGT777390.11860368137197816No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATT759530.11587884345368293No Hit

[OK]Adapter Content

Adapter graph