FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000883830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000883830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26563670
Sequences flagged as poor quality0
Sequence length36
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATT1640740.6176631466962208No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCT580490.21852778625844999No Hit
ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGT444730.16742039033010123No Hit
GTTCTACAGTCCGACGATCGTTCTACAGTCCGACGA375560.1413810666974857No Hit
GCTAAACCTAGCCCCAAACCCACTCCACCTTACTAC363610.1368824413192906No Hit
CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAA301190.11338418223084386No Hit
TAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAG298460.11235646279298005No Hit
GACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCAT266640.10037769630476512No Hit
CAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATG266400.10028734734319467No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)