FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888010

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888010
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99355
Sequences flagged as poor quality0
Sequence length151
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAGGTAAGAGAGTGTGGATAGTATAGAAATAGTGTGGGGTTGTGGTGG90449.102712495596597No Hit
AATGGTTGTTAGAGTTGTAGGGTTTTTTTTAGGGTTTCGTTTTCGTTTAG68046.848170701021589No Hit
GTTTGGAGGAGTTGGTTTTTTAGAGTTGGTGTTGTTGGTGTTGTATTTTG63516.392229882743697No Hit
GGTAGTTGGGTGATTTTTTTATAGGAGTTTAGGTGGTTGTTGACGGTTTT62946.334859846006744No Hit
GGTTAGGAGAATTTTAGGATTTTGGGTTTTTTTTATAGTAGATTGGAGGA56365.672588193850334No Hit
TAGAAAGGTGGGATAGTTTAAAGGGGGATTTTTAGGTTATAGGTAAATTT54855.520607921091037No Hit
GGGGATTGGGATAAAGGAGTATTATTTTCGGTTTTTGTTTGAGTGATTTC51645.197524029993458No Hit
AAAATATTAGAGGAAGGAGGGGTTTGGGTTTCGTTGGTTTTGTTTAAAAA45714.600674349554628No Hit
GGATTTTTTTGATTTTTTTGTTTTGAATTTTTTATGAATTTTTTCTTTAT44394.467817422374314No Hit
GGTTTGGAAGGTGGGTATTATATTTTGTTTTGTTTTCGAAGTTTAGTTTT43074.334960495194001No Hit
GTTGGGATTTTAGTTTATTTTTGTAATTTAAATATTTTTTAGTAAAGTTT37673.7914548840018116No Hit
GGTTTGGAAGGTGGGTATTATATTTTGTTTTGTTTTTGAAGTTTAGTTTT22662.28071058326204No Hit
GGTAGGAGGGGTTGTATAAGGTTTTGGAGAGGAGGTTTTTAGATTAGACC15891.5993155855266468No Hit
GGTAGTTGGGTGATTTTTTTATAGGAGTTTAGGTGGTCCTTGACGGTTTT14851.4946404307785215No Hit
ATTATTTTTTTAGGGAGTTGGGTTGTATTTTATTTGTTGTTTTGTTTTTA12451.2530823813597705No Hit
GAAGTTGTGGAATTTAGGTAGGAGTGGGGGTTGGGAGAGACCAAGTCTCT12361.2440239545065674No Hit
TAGAAAGGTGGGATAGTTTAAAGGGGATTTTTAGGTTATAGGTAAATTTA10521.0588294499521917No Hit
GGGTGTTTAGGTATTAGGGAGTTGTACACTGACGACATGGTTCTACGGGG8940.8998037340848473No Hit
GGTTAGGAGAATTTTAGGATTTTGGGTTTTTTTATAGTAGATTGGAGGAG7510.7558753963061748No Hit
AATGGTTGTTAGAGTTGTAGGGTTTTTTTAGGGTTTCGTTTTCGTTTAGT6040.6079210910371898No Hit
GGTTGGAGTTTTAGGTGTATTTGTGGGGGATAGTAGTGAGTTTTAAGACC4630.4660057370036737No Hit
GGATTTTTTTGATTTTTTTGTTTTGGATTTTTTATGAATTTTTTCTTTAT3290.3311358260782044No Hit
GGTTGGAGTTTTAGGTGTATTTGGTTGTGGGGGATAGTAGTGAGTTTTAA3270.32912284233304817No Hit
GGGAGGTAAGAGAGTGTGGATAGTATAGAAATAGTATGGGGTTGTGGTGG3250.32710985858789193No Hit
AAAATATTAGAGGAAGGAGAGGTTGGGATGTAAGGAGATATAGACCAAGT2620.26370087061546976No Hit
GGTTGGAGTTTTAGGTGTATTTGGGGTTGTGGGGGATAGTAGTGAGTTTT2530.25464244376226663No Hit
GGTAGTTGGGTGATTTTTTTATAGGATTTTTAGGGAGTGGTTGGAGACCA2340.23551909818328218No Hit
GGTTAGGAGAATTTTAGGATTTTGGGTTTTTTTTCTAGTAGATTGGAGGA2280.22948014694781338No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1980.19928539077046953No Hit
GGTTAGGAGAATTTTAGGATTTTGGGTTTTTTTTTATAGTAGATTGGAGG1880.18922047204468825No Hit
GGATTTTTTTGATTTTTTTGTTTTGAATTTTTTATGAATTTTTTTTTTAT1730.1741230939560163No Hit
GGGGATTGGGATAAAGGAGTATTATCTTCGGTTTTTGTTTGAGTGATTTC1730.1741230939560163No Hit
GGGAGGTAAGAGAGTGTGGATAGTATAGAAATAGTGTGGGGTTATGGTGG1700.17110361833828192No Hit
GAAGTTGTGGAATTTAGGTAGGAATGGGGGTTGGGAGAGACCAAGTCTCT1690.1700971264657038No Hit
GAGAGTAGTAGGAGGAGGAGGAGGGATTAGGTGGTGGAGGAGGGATTGGG1620.16305168335765688No Hit
AATGGTTGTTAGAGTTGTAGGGTTTTTTTTTAGGGTTTCGTTTTCGTTTA1580.15902571586734437No Hit
GGGAGGTAAGAGAGTGTGGATAGTATAGAAGTAGTGTGGGGTTATGGTGG1230.12379850032710984No Hit
GGATTTTTTTGATTTTTTTGTTTTGAATTTTTTATGAATTTTTTATTTAT1230.12379850032710984No Hit
GGTTAGGAGAATTTTAGGATTTTGGTTTTTTTTATAGTAGATTGGAGGAG1220.12279200845453173No Hit
AAAATATTAGAGGAAGGAGGGGTTGGGATGTAAGGAGATATAGACCAAGT1010.10165567913039103No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)