FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888011

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888011
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99355
Sequences flagged as poor quality0
Sequence length151
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCAAAATCCTAAAATTCTCCTAACCGCAAAAACTCCCCACAAAAACAAA77077.757032861959639No Hit
CCAACCACTCCCTAAAAATCCCCCCAAAAAAACCTATTACATCTACTCCG57825.819536007246741No Hit
TCTCAAACCTACTACCTAAAAACCTCATCCGCATAATACAACCTAAATCC55565.592068844044085No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCACCACAACCCGAACACTA54235.458205424991193No Hit
AACTAATCTAAACCTCCTAACCTCAAACGATCTATCTACTTCTACCTCCG54135.448140506265412No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACGAAACCCTAAAAAA44404.468823914246892No Hit
ATATCTCCTTACATCCCAACCTCATCTATACAACAAAAAACCAAAAACTT39393.9645714860852497No Hit
AAAATTTAATCCTCAATCCAATCCTAAACCACCAACATCCTCTATTAATC34523.474409944139701No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAACTCTACTAACCCATCTCCGA27142.731618942177042No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAATTCCACTAACCCCGAA22182.23239897337829No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAACTCTACTAACCCATCTCCGAA19401.9525942328015702No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAATTCCACTAACCCCGAAC19171.9294449197322732No Hit
AATCTAAAAACCTCCTCTCCAAAACCTTATACAACCCCTCCTACCTGTAG16031.6134064717427405No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAAACCCCCCCAA15581.568114337476725No Hit
CCCAAAATCCTAAAATTCTCCTAACCTCAAAAACTCCCCACAAAAACAAA15321.5419455487896936No Hit
CCAACCACTCCCTAAAAATCCCCCCAAAAAAACCTATTACATCTACTCCA13721.380906849177193No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAACCCCCCCAAC13631.3718484223239897No Hit
CTCCCAACCCCCACTCCTACCTAAATTCCACAACTTCTGTAGAACCATGT12981.3064264506064114No Hit
AAAAACTAACACACACTTATACCCCCGAAACAACCATAAATACACAAAAA11081.1151929948165669No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAAACTCTACTAACCCATCTCCG9670.9732776407830508No Hit
ACTAAATAAAAACTTACCCAACCCCCTAATACCTAAACACCCCGTAGAAC8410.8464596648382064No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAATTCCACTAACCCCGAACC8020.8072064818076594No Hit
CAAATCCCTAATCTCACCTAAAAAAAAACTCTACTAACCCATCTCCGAAT7690.7739922500125811No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAAATTCCACTAACCCCGA7340.7387650344723466No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAACCCCCCCAACA7200.7246741482562529No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAAAACCCCCCCA7030.7075637864224246No Hit
CCTACAAACCCTACAACAAATCCATACCCCCCACCACAACCCGAACACTA5950.5988626641839867No Hit
TCTCAAACCTACTACCTAAAAACCTCATCCTCATAATACAACCTAAATCC5930.5968496804388305No Hit
TAAAACTCACTACTATCCCCCACAAATACACCTAAAACTCCAACCTGTAG4830.4861355744552363No Hit
CCTAAAACAAACTAATACCACCCACTAAACTAAAACGAAACCCTAAAAAA3830.3854863871974234No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACTAAACCCTAAAAAA3460.3482461879120326No Hit
CACTAATCTAAACCTCCTAACCTCAAACGATCTATCTACTTCTACCTCCG3450.3472396960394545No Hit
TAAAACTCACTACTATCCCCCACAACCAAATACACCTAAAACTCCAACCT3270.32912284233304817No Hit
CTATCTCCTTACATCCCAACCTCATCTATACAACAAAAAACCAAAAACTT3130.31503195611695434No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAACTCTACTAACCCATCTCCTAA3080.3099994967540637No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAAAACTCTACTAACCCATCTCC3000.3019475617734387No Hit
CCTCAAACCTACTACCTAAAAACCTCATCCGCATAATACAACCTAAATCC2890.29087615117507926No Hit
AAAAACTAACACACACTTATACCCCCTAAACAACCATAAATACACAAAAA2720.27376578934125106No Hit
ATATCTCCTTACATCCCAACCTCTCCTTCCTCTAATATTTTTGTAGAACC2580.2596749031251573No Hit
CCAACCACTCCCTAAAAATCCTATAAAAAAATCACCCAACTACCTGTAGA2510.25262946001711034No Hit
TAAAACTCACTACTATCCCCCACAACCCCAAATACACCTAAAACTCCAAC2380.23954506567359468No Hit
CAAATTTAATCCTCAATCCAATCCTAAACCACCAACATCCTCTATTAATC2370.23853857380101653No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAAAAACCCCCCC2260.22746716320265714No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAACCCCCCCAACAA2220.22344119571234464No Hit
CAAAACTAACTCTAAAATTTCCTTTTTCAATCTTAACCTAATAACCAACT2190.22042172009461022No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAAAACCCCCCAA2170.21840873634945399No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAAAATTCCACTAACCCCG2070.2083438176236727No Hit
AACTAATCTAAACCTCCTAACCTCAAACTATCTATCTACTTCTACCTCCG1930.1942529314075789No Hit
ATCAAAAAACCCCCAACCACAACCGAAACCCTCCTCCCCTACCCCGACCT1860.187207488299532No Hit
AAATAATAACATTAAATACTCCTCCCAATCCCTCCTCCACCACCTAATCC1860.187207488299532No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAAACCCCCCAAC1850.18620099642695384No Hit
CTCCCAACCCCCATTCCTACCTAAATTCCACAACTTCTGTAGAACCATGT1770.1781490614463288No Hit
ATATCTCCTTACATCCCAACCTCATCTATACAACAAAAACCAAAAACTTC1650.16607115897539126No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAATTCCACTAACCCCGAACCC1530.15399325650445372No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAATTCCACTAACCCCTAA1490.1499672890141412No Hit
CTCAAACCTACTACCTAAAAACCTCATCCGCATAATACAACCTAAATCCC1470.14795430526898495No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCACCACAACCCTAACACTA1440.14493482965125057No Hit
CCAACCACTCCCTAAAAATCCCCCCAAAAAACCTATTACATCTACTCCGA1430.14392833777867245No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAAAAAACCCCCC1390.13990237028835992No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAAAAACCCCCCA1370.13788938654320365No Hit
CACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAAACCCCCCCAA1300.13084394343515676No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAATTCCACTAACCCCTAAC1260.12681797594484423No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAACCCCCCAACA1220.12279200845453173No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAAAAACTCTACTAACCCATCTC1200.12077902470937547No Hit
CCAACCACTCCCTAAAAATCCCCCCAAAAAAAACCTATTACATCTACTCC1160.11675305721906294No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAATTCCACTAACCCCAAA1130.11373358160132857No Hit
CCAACCACTCCCTAAAAATCCCCCAAAAAAACCTATTACATCTACTCCGA1060.10668813849328167No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)