FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888055

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888055
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83534
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAAAACTCAACAACCTAAACCCCGAAAATAACTACTAAACTACCTACCG52216.250149639667681No Hit
CCCAAAATCCTAAAATTCTCCTAACCACAAAAACTCCCCACAAAAACAAA30103.6033231977398423No Hit
ACTAAATAAAAACTTACCCAACCCCACTCTACCAATCCCCTTCCTCCCAT27313.269327459477578No Hit
AAAATTAACCTAAAAATCCCCACAACCTTAACTCTACCTATATTCCCACA23322.7916776402422965No Hit
CTCCAAACTACAAAAAACTCCTTCAAATCACCTATCCACCTCCTAAAACA20602.466061723370125No Hit
ATATAATACCCACCTTCCAAACCACGAACCCGCAACCCAATCCTAAAAAC16021.9177819809897765No Hit
AATCTAAAAACCTCCTCTCCAAAACTAAATCTTACACACCCCCAAAATTA15821.8938396341609405No Hit
ACAAACCAACCTAAATTAAAATCCCAACTCCTTAATAACCGTCCTAACCT15821.8938396341609405No Hit
TAATACCAACTATACCACTCAACTCCAAAAAATTACCTTCCAAAAACTCT15421.845954940503268No Hit
CCCTTTAAACTATCCCACCTTTCTAAACGAAACCAATATACATCTTAAAT15251.8256039456987574No Hit
CCAACCACTCCCTAAAAATCCCCCCAAAAAAACCTATTACATCTACTCCG15101.8076471855771301No Hit
ATATCTCCTTACATCCCAACCTCATCTATACAACAAAAAACCAAAAACTT15081.8052529508942465No Hit
AAATAATAACATTAAATACTCCTCCCAACTTAACCAAACTTAAATCCTCC14441.728637441041971No Hit
ACCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCT14281.709483563578902No Hit
TCTCAAACCTACTACCTAAAAACCTCATCCGCATAATACAACCTAAATCC13891.6627959872626714No Hit
CCACCTAAACTCCTATAAAAAAATCACCCAACTACCGAAACCCATTCGAA13661.63526228840951No Hit
AACTAATCTAAACCTCCTAACCTCAAACGATCTATCTACTTCTACCTCCG13581.6256853496779755No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACGAAACCCTAAAAAA12441.4892139727536093No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCGCCACAACCCAAACACTA11311.353939713170685No Hit
TAATACCAACTATACCACTCAACTCCGAAAAATTACCTTCCAAAAACTCT9981.1947231067589246No Hit
TACCTTCCAAAAACTCTAAACATCCCCATACAACTACAAAACACCCAAAA9341.1181075969066487No Hit
AAAATTTAATCCTCAATCCAATCCTAAACCACCAACATCCTCTATTAATC9271.1097277755165562No Hit
ACACTCTAAAATTTCCCCTAAAAAACTAATTCAAACCATAACGAAAAATA8921.0678286685660927No Hit
ACAAACCAACCTAAATTAAAATCCCAACTCCTTAATAACCATCCTAACCT8771.0498719084444659No Hit
TACCTTCCAAAAACTCTAAACATCCCCGTACAACTACGAAACACCCAAAA8501.017549740225537No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCGCCACGACCCGAACACTA8371.0019872147867934No Hit
ATATAATACCCACCTTCCAAACCACAAACCCGCAACCCAATCCTAAAAAC8340.998395862762468No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACATCTAAAA8260.9888189240309335No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACGTCTAAAA8140.9744535159336318No Hit
TCCCTAATCTCAAAAAACATAAACTAACTCTAAAACCAAAAATTTCGATT7990.9564967558120048No Hit
ACACTCTAAAATTTCCCCTAAAAAACTAATTCAAACCATAACAAAAAATA7010.8391792563507074No Hit
TAAAACTCACTACTATCCCCCACAAACTAAAACTAAAAAACAAACTCTAA6980.8355879043263822No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAACTCTACTAACCCATCTCCGA6820.8164340268633132No Hit
CCAACCACTCCCTAAAAATCCCCCCAAAAAAACCTATTACATCTACTCCA6800.8140397921804295No Hit
AACCTTTATTTAATCAAAACTACTTAATTCAAAAAATATCCACATTACTC6050.7242559915722939No Hit
CCCAAAATCCTAAAATTCTCCTAACCGCAAAAACTCCCCACAAAAACAAA5780.6919338233533652No Hit
AACCCAATCTAAAACCAAAAACCTACGCATCCAATATAAAAAAAACAACT5550.6644001245002035No Hit
CCAAAAAAACCAACAAAAAAACTAAATAAAACCGAAAACTTCTCCATCTT5320.6368664256470419No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCACCACGACCCGAACACTA5050.6045442574281131No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAATTCCACTAACCCCGAA4940.5913759666722532No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAACTCTACTAACCCATCTCCGAA4510.5398999209902554No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAACCCCCCCAAC4390.5255345128929538No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCACCACGACCCAAACACTA4390.5255345128929538No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAAACCCCCCCAA4160.4980008140397922No Hit
AAAAACTAACACACACTTATACCCCCGAAACAACCATAAATACACAAAAA3830.45849594177221253No Hit
CTCCCAACCCCCACTCCTACCTAAATTCCACAACTTCTGTAGAACCATGT3680.4405391816505854No Hit
CCAAAAAAACCAACAAAAAAACTAAATAAAACCAAAAACTTCTCCATCTT3180.380683314578495No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAATTCCACTAACCCCGAAC2860.3423755596523571No Hit
AACCTTTATTTAATCAAAACTACTTAATTCAAAAAATATCCACGTTACTC2560.3064620394091029No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAATTCCACTAACCCCAAA2520.3016735700433356No Hit
CCAACCACTCCCTAAAAATCCCCCCAAAAAAACCTATTACATCTACCCCG2520.3016735700433356No Hit
CCACCTAAACTCCTATAAAAAAATCACCCAACTACCGAAACCCATTCTAA2400.2873081619460339No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAAACTCTACTAACCCATCTCCG2390.28611104460459214No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAACCCCCCCAACA2290.2741398711901741No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAATTCCACTAACCCCAAAC2100.2513946417027797No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAACTCTACTAACCCATCTCCAA2090.2501975243613379No Hit
TAATACCAACTATACCACTCAACTCCTAAAAATTACCTTCCAAAAACTCT2020.24181770297124522No Hit
ACTAAATAAAAACTTACCCAACCCCGCTCTACCAATCCCCTTCCTCCCAT2010.24062058562980346No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCGCCACAACCCGAACACTA1900.22745229487394353No Hit
ACTAAATAAAAACTTACCCAACCCCACTCTACCGATCCCCTTCCTCCCAT1890.22625517753250174No Hit
TCCCTAATCTCAAAAAACATAAACTACCTCTACTACCAACTCCAACTATT1860.2226638255081763No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAACTCCACTAACCCATCTCCGA1860.2226638255081763No Hit
ATATAATACCCACCTTCCAAACCACTAACCCGCAACCCAATCCTAAAAAC1710.2047070653865492No Hit
CCACCTAAACTCCTATAAAAAAATCAACCAAATGTAGAACCATGTCGTCA1600.1915387746306893No Hit
CAAATCCCTAATCTCACCTAAAAAAAAACTCTACTAACCCATCTCCGAAT1570.18794742260636388No Hit
AACAACAATATTTCCTAATCCTCCCAACTAAAAAAAAAAAAACCCCCCCA1540.18435607058203846No Hit
ACCAAACAACCAAACTAAACAACGCTAAAAACTAAAAACCCAAATATCCT1500.17956760121627122No Hit
CCTAAATAAAAACTTACCCAACCCCACTCTACCAATCCCCTTCCTCCCAT1490.1783704838748294No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAAATTCCACTAACCCCGA1440.17238489716762037No Hit
AACCCAATCTAAAACCAAAAACCTACTCATCCAATATAAAAAAAACAACT1430.17118777982617855No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAACTCTACTAACCCATCTCCAAA1430.17118777982617855No Hit
CTCCCAACCCCCACTCCTAAACACACCATTCCAAAACATATCCTAAACCA1420.16999066248473677No Hit
TACCTTCCAAAAACTCTAAACATCCCCATACAACTACGAAACACCCAAAA1380.16520219311896953No Hit
CCTAAAACAAACTAATACCACCCACTAAACTAAAACGAAACCCTAAAAAA1360.16280795843608592No Hit
CCCAAAATCCTAAAATTCTCCTAACCTCAAAAACTCCCCACAAAAACAAA1280.15323101970455144No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAATTCCACTAACCCCGAACC1260.1508367850216678No Hit
ATATAATACCCACCTTCCAAACCACGAACCCACAACCCAATCCTAAAAAC1250.14963966768022602No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAACTCCACTAACCCATCTCCGAA1230.1472454329973424No Hit
TCTCAAACCTACTACCTAAAAACCTCATCCTCATAATACAACCTAAATCC1230.1472454329973424No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCTCCACAACCCAAACACTA1170.14006272894869157No Hit
ATATAATACCCACCTTCCAAACCACGAACCCTCAACCCAATCCTAAAAAC1160.13886561160724975No Hit
AAAATTAACCTAAAAATCCCCACAACCTTAAATCTACCTATATTCCCACA1060.12689443819283167No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACTAAACCCTAAAAAA1050.12569732085138985No Hit
CCACCTAAACTCCTATAAAAAAATCACCCAACTACCTAAACCCATTCGAA1040.12450020350994805No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCTCCACGACCCGAACACTA960.11492326477841358No Hit
AAAAACTAACACACACTTATACCCCCTAAACAACCATAAATACACAAAAA930.11133191275408814No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACTTCTAAAA850.10175497402255369No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)