FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888083

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888083
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18575
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAATCCCTAATCTCACCTAAAAAAAAAAACTCTACTAACCCATCTCCGA12866.9232839838492595No Hit
AAAATTAACCTAAAAATCCCCACAACCTTAACTCTACCTATATTCCCACA11436.15343203230148No Hit
CCCTTTAAACTATCCCACCTTTCTAAACGAAACCAATATACATCTTAAAT9505.114401076716016No Hit
TAATACCAACTATACCACTCAACTCCAAAAAATTACCTTCCAAAAACTCT9425.071332436069986No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAACTCTACTAACCCATCTCCGAA7784.18842530282638No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCGCCACGACCCGAACACTA7624.102288021534321No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCGCCACAACCCGAACACTA7053.7954239569313595No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCACCACGACCCAAACACTA5583.0040376850605655No Hit
TAATACCAACTATACCACTCAACTCCGAAAAATTACCTTCCAAAAACTCT5202.7994616419919245No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAAACTCTACTAACCCATCTCCG4602.4764468371467023No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAATTCCACTAACCCCGAA4292.309555854643338No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACGAAACCCCGAAAAA3732.0080753701211305No Hit
AACTAATCTAAACCTCCTAACCTCAAACGATCTATCTACTTCTACCTCCG3621.9488559892328399No Hit
ACTAAATAAAAACTTACCCAACCCCACTCTACCAATCCCCTTCCTCCCAT3131.6850605652759083No Hit
CAAATCCCTAATCTCACCTAAAAAAAAACTCTACTAACCCATCTCCGAAT3131.6850605652759083No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAATTCCACTAACCCCGAAC3001.6150740242261103No Hit
ACTAAATAAAAACTTACCCAACCCCGCTCTACCAATCCCCTTCCTCCCAT2931.5773889636608345No Hit
AAAAACTAACACACACTTATACCCCCGAAACAACCATAAATACACAAAAA2721.4643337819650069No Hit
ACCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCT2641.421265141318977No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACGAAACCCTAAAAAA2061.1090174966352624No Hit
CCCTTTAAACTATCCCACCTTTCTAAACAAAACCAATATACATCTTAAAT1800.9690444145356661No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAAAACTCTACTAACCCATCTCC1670.8990578734858682No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAAATTCCACTAACCCCGA1650.8882907133243608No Hit
ACTAAATAAAAACTTACCCAACCCCGCTCTACCGATCCCCTTCCTCCCAT1210.6514131897711979No Hit
TAATACCAACTATACCACTCAACTCCTAAAAATTACCTTCCAAAAACTCT1190.6406460296096904No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAATTCCACTAACCCCGAACC1140.6137281292059219No Hit
CCAAAAAAACCAACAAAAAAACTAAATAAAACCGAAAACTTCTCCATCTT1110.5975773889636609No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAACTCTACTAACCCATCTCCTAA930.5006729475100942No Hit
CAAATTAACCTAAAAATCCCCACAACCTTAACTCTACCTATATTCCCACA930.5006729475100942No Hit
CCTACAAACCCTACAACAAATCCATACCCCCCGCCACGACCCGAACACTA910.4899057873485868No Hit
CCTACAAACCCTACAACAAATCCATACCCCCCGCCACAACCCGAACACTA830.44683714670255725No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCTCCACGACCCGAACACTA810.4360699865410498No Hit
CAATACCAACTATACCACTCAACTCCAAAAAATTACCTTCCAAAAACTCT760.40915208613728127No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCTCCACAACCCGAACACTA670.360699865410498No Hit
CCAAAACTCAACAACCTAAACCCCGAAAATAACTACTAAACTACCTACCG640.3445491251682369No Hit
TCTCAAACCTACTACCTAAAAACCTCATCCGCATAATACAACCTAAATCC630.3391655450874832No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAAAATTCCACTAACCCCG610.3283983849259758No Hit
AACTAATCTAAACCTCCTAACCTCAAACGATCTATCTACTTCTACATCCG600.3230148048452221No Hit
AAAAACTAACACACACTTATACCCCCTAAACAACCATAAATACACAAAAA560.30148048452220727No Hit
CCTACAAACCCTACAACAAATCCATACCCCCCACCACGACCCAAACACTA510.27456258411843876No Hit
CAAATCCCTAATCTCACCTAAAAAAAAAAAAAACTCTACTAACCCATCTC510.27456258411843876No Hit
CCTAAATAAAAACTTACCCAACCCCACTCTACCAATCCCCTTCCTCCCAT470.2530282637954239No Hit
CCCTTTAAACTATCCCACCTTTCTAAACTAAACCAATATACATCTTAAAT410.22072678331090176No Hit
CAATACCAACTATACCACTCAACTCCGAAAAATTACCTTCCAAAAACTCT370.19919246298788695No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACTAAACCCCGAAAAA360.19380888290713325No Hit
CAAATCCCTAATCTCACCTAAAAAAAACTCTACTAACCCATCTCCGAATC360.19380888290713325No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAATTCCACTAACCCCTAA360.19380888290713325No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAATTCCACTAACCCCAAA360.19380888290713325No Hit
CAAAACTAACTCTAAAATTTCCTTTTTCAATCTTAACCTAATAACCAACT340.18304172274562586No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACGAAACCCCAAAAAA330.17765814266487212No Hit
AAAATTTAATCCTCAATCCAATCCTAAACCACCAACATCCTCTATTAATC320.17227456258411844No Hit
ACTAAATAAAAACTTACCCAACCCCTCTCTACCAATCCCCTTCCTCCCAT310.16689098250336473No Hit
CCTAAAACAAACTAATACCACCCACTAAACTAAAACGAAACCCCGAAAAA310.16689098250336473No Hit
CCAAAAAAACCAACAAAAAAACTAAATAAAACCAAAAACTTCTCCATCTT280.15074024226110364No Hit
CCCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCT260.13997308209959622No Hit
CCTAAATAAAAACTTACCCAACCCCGCTCTACCAATCCCCTTCCTCCCAT260.13997308209959622No Hit
CACTAATCTAAACCTCCTAACCTCAAACGATCTATCTACTTCTACCTCCG250.13458950201884254No Hit
CAAATCCCTAATCTCACCTAAAAAAAAACTCTACTAACCCATCTCCTAAT230.12382234185733512No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCGCCACGACCCTAACACTA230.12382234185733512No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAATTCCACTAACCCCTAAC230.12382234185733512No Hit
ACTACAAACCCTACAACAAATCCATACCCCCCGCCACAACCCTAACACTA220.11843876177658143No Hit
GCTACAAACCCTACAACAAATCCATACCCCCCGCCACGACCCGAACACTA220.11843876177658143No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACTAAACCCTAAAAAA220.11843876177658143No Hit
AACCTTTATTTAATCAAAACTACTTAATTCAAAAAATATCCACATTACTC200.10767160161507401No Hit
CCCTTTAAACTATCCCACCTTTCTAAACGAAACCGATATACATCTTAAAT200.10767160161507401No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAAAAAAAATTCCACTAACCCC190.10228802153432032No Hit
TCTCAAACCTACTACCTAAAAACCTCATCCACATAATACAACCTAAATCC190.10228802153432032No Hit
CCCTAAAAACAAACTAAAACTATAAAAAAAATTCCACTAACCCCGAACCC190.10228802153432032No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)