FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21428
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTGGAGGAGTTGGTTTTTTAGAGTTGGTGTTGTTGGTGTTGTATTTTG315114.705058801568041No Hit
AATGGTTGTTAGAGTTGTAGGGTTTTTTTCGGGGTTTCGTTTTCGTTTAG269412.57233526227366No Hit
GGATAAGAGATAGGTTTGTGTTTTGAATTCGGTTTTTTTTGTTTGTTTGT217010.12693671831249No Hit
AAAGAGATTTATTTTGAGTGATTATGGTTCGTGATATAGTTTTAGGAGAT14486.757513533694231No Hit
GGTTTGGAAGGTGGGTATTATATTTTGTTTTGTTTTTGAAGTTTAGTTTT14246.64551054694792No Hit
TGGGTTTTAGATATTTGTTTTTTTTGGTCGGTTTGTTTTTAATTTTTTAG13596.342169124509987No Hit
GGGTGTTTAGGTATTAGGGAGTTGTATGGGGTAGTGTTTGGGTTGTGGTG6202.893410490946425No Hit
GGGTGTTTAGGTATTAGGGAGTTGTATGGGGTAGTGTTCGGGTCGTGGCG5502.5667351129363447No Hit
AATGGTTGTTAGAGTTGTAGGGTTTTTTTTGGGGTTTTGTTTTCGTTTAG5142.3987306328168754No Hit
GGGGATTGGGATAAAGGAGTATTATTTTCGGTTTTTGTTTGAGTGATTTC4281.9973865969759192No Hit
AATGGTTGTTAGAGTTGTAGGGTTTTTTTTAGGGTTTCGTTTTCGTTTAG3881.8107149523987307No Hit
ATTATTTTTTTAGGGAGTTGGGTTGTATTTTATTTGTTGTTTTGTTTTTA3741.7453798767967144No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGTT3001.4000373343289154No Hit
GGATAAGAGATAGGTTTGTGTTTTGAATTCGGTTTTTTTGTTTGTTTGTG1840.8586895650550682No Hit
GGATTTTTTTGATTTTTTTGTTTTGAATTTTTTACGAATTTTTTTTTTAT1390.6486839649057308No Hit
AATGGTTGTTAGAGTTGTAGGGTTTTTTCGGGGTTTCGTTTTCGTTTAGT1000.4666791114429718No Hit
GGATTTTTTTGATTTTTTTGTTTTGAATTTTTTATGAATTTTTTTTTTAT890.415344409184245No Hit
TGGGTTTTAGATATTTGTTTTTTTGGTCGGTTTGTTTTTAATTTTTTAGG890.415344409184245No Hit
TAGAAAGGTGGGATAGTTTAAAGGGGGATTTTTAGGTTATAGGTAAATTT880.41067761806981523No Hit
TTGGTGGGGAGGTTTTGATAGGTTTTGGGTTTGGGTTTAGGACGGTGAGG790.36867649803994773No Hit
GGATTTTTTTGATTTTTTTGTTTTGAATTTTTTATGAATTTTTTTTTATT720.3360089602389397No Hit
GGATTTTTTTGATTTTTTTGTTTTGAATTTTTTACGAATTTTTTTTTATT710.33134216912451No Hit
GTTTGGAGGAGTTGGTTTTTAGAGTTGGTGTTGTTGGTGTTGTATTTTGG490.22867276460705618No Hit
AATGGTTGTTAGAGTTGTAGGGTTTTTTTGGGGTTTTGTTTTCGTTTAGT490.22867276460705618No Hit
TTGAGGTTATTAGAAGGGAGGTTTTAGTTATATAGGGTGGAAGAATTTAA400.18667164457718874No Hit
GGATAAGAGATAGGTTTGTGTTTTGAATTCGGTTTTTTTTTGTTTGTTTG390.18200485346275902No Hit
AAAGAGATTTATTTTGAGTGATTATGGTTCGTGATATAGTTTTAGGAGAC380.1773380623483293No Hit
AATGGTTGTTAGAGTTGTAGGGTTTTTTTAGGGTTTCGTTTTCGTTTAGT350.16333768900504014No Hit
GTTGGGATTTTAGTTTATTTTTGTAATTTAAATATTTTTTAGTAAAGTTT330.1540041067761807No Hit
GTTTGGAGGAGTTGGTTTTTTAGAGTTGGTGTCGTTGGTGTTGTATTTTG330.1540041067761807No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT320.14933731566175099No Hit
TGGGTTTTAGATATTTGTTTTTTTTGTCGGTTTGTTTTTAATTTTTTAGG320.14933731566175099No Hit
GGAAGGTATGTGGGGTTTAGTTTTAAGTTTGGTATCGTCGTTTTTTTTTA290.13533694231846183No Hit
GGTTTGGAAGGTGGGTATTATATTTTGTTTTGTCTTTGAAGTTTAGTTTT290.13533694231846183No Hit
GGATTTTTTTGATTTTTTTGTTTTGAATTTTTTACGAATTTTTTTTTTTA280.1306701512040321No Hit
GTTTGGAGGAGTTGGTTTTTTAGAGTTGGTGTTGTATTTTGGGTTTGGTT270.1260033600896024No Hit
AATGGTTGTTAGAGTTGTAGGGTTTTTTTCGGGGTTTCGTTTTTGTTTAG250.11666977786074295No Hit
GGTTAGGAGAATTTTAGGATTTTGGGTTTTTTTTATAGTAGATTGGAGGA220.10266940451745381No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)