FastQCFastQC Report
Sun 4 Sep 2022
EGAF00000888097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences258110
Sequences flagged as poor quality0
Sequence length301
%GC32

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCATTCAAAAAACCCAAAAAACCAAACCCAACTCATTCCACACCAACAT68022.6353105265197008No Hit
TAATCTAAACCTCCTAACCTCAAACGATCTATCTACTTCTACCTCCGCCT67092.599279377009802No Hit
CCATAAAAACAAAAACCTAAAAAAAACTAAAACACCTATTAACCTATCCC66112.561311068924102No Hit
AAACCTATCAAAACCTCCCCACCAAAAACCTACCGCTCTAACCACCCTCG62082.4051760877145405No Hit
AACCCCAAATACAAAAAAATACACCACTAAAACCGAAAAATAAACCCCTA59752.314904498082213No Hit
AAAACAAAAAAAACTCCTAATCCCTATAACCTCAAAACGACCATCAAACA51361.9898492890628026No Hit
ATAATACTCCTTTATCCCAATCCCCAAAACCCTTCACCAAAAATACTAAA50541.958079888419666No Hit
AAAAAAAATCCCAAAACAAACATACGAAATCAAAAAAATACCTAAAATAA47621.8449498275928868No Hit
CCAACTAAAACTCAACATAATATCAAACAAAACAAAACGCACACTTCAAT47451.8383634884351634No Hit
ATACAAAACAAACCCCTATCTCCTCTACCGCGACCTTAAAAAACAATACC47081.824028514974236No Hit
AACCTCCTCTCCAAAACTAAATCTTACACACCCCCAAAATTAATTTATAC45841.7759869822943708No Hit
TAAAACTAAACCCCACATACCTTCCTCCAAATATAAAACCACCAAACGCT45391.7585525551121615No Hit
CATAATCACCCACAACAAATTTCCCACCACCAAAATAAACCACCCCCTAA45291.7546782379605594No Hit
TACTATCCACACTCTCTTACCTCCCAACCCCCACACTCCCTTCTAACACC41501.6078416179148423No Hit
ACTCCCTTTTCCCTTTAACTTTATTATATCCCTCTAAAAATTTCTAAAAT41191.5958312347448762No Hit
AAACTACAAAATCAAAACCAACCCAAAACCACACCAAACCCCCACAAAAC41001.5884700321568321No Hit
AAAAACCACAAAAACCTTCTCAATATTCATAAAAAAACCCAATTCACCCA39131.5160203014218745No Hit
AAAAATCCTAAAAACCCCAAAACTACGAACTAACGAAAAAAATAATCACA38891.5067219402580294No Hit
CAACCATAAATACACAAAAAACAACCTATACCACTACTAAATACACGACC38571.494324125372903No Hit
AATAAAAAACTCCCTCTTCCAAAAAATTATTTAAAATTCAAAACCTTATT37821.4652667467358877No Hit
CAACTACCAAACCCTAAAAAACCACTCTACGCTAACCGAAACCCAAAAAA36071.3974661965828523No Hit
AATACCTTAACTCCCTAAAACCCAAATATAAATCAAAAATATCCCAAAAC33861.3118437875324473No Hit
AATATTTAAAAAACCCTACCTTAAAAACACATTCACTTACCAATCCACTC33121.2831738406105924No Hit
ACTCTAAAAAACCAACTCCTCCAAACAAAAACTCCTAAAACCTCAACAAA32801.2707760257254659No Hit
AAAAAAATCCTTCCAACCAATAAAAACGATAACTAACCAAATAAATAACT30851.1952268412692262No Hit
CATAACACAAACACAAAAAACCAACCAAAAAAAAATCCTATAACTCTAAA27791.0766727364302042No Hit
TCCAACCAATAACACTATCTCTAACCTCGATTTCCTCATCTATCCTATAA27621.0700863972724806No Hit
AACTTACACATCTCAAAAAAACCCAAAAAACCCCGCAACCACGCTACCTT27381.060788036108636No Hit
ACCCCCAAAAAAACCTACTCATAAACGCTTAAAACCCCCACCACCCGCAA26791.037929564914184No Hit
CCTAAAAAAACAACACTCCAAACACATATACCCAAACCCTAAATCCCACC26641.0321180891867807No Hit
CCCCTAATAAAAACTTCCTTCCACTAACCACAAACATTAAAACCTTCATC25520.988725737088838No Hit
AACCCTAACTCCCTTACAACTTCACCCCACACTATCAACTAAAAACAAAA24480.9484328387121771No Hit
CCACACTCCTAAAAACCTAACTTCCACACACAAATTTCCCACACTACACC23740.919762891790322No Hit
ACTCCCTTTTCCCTTTAACTTTATTATATATCCCTCTAAAAATTTCTAAA23570.9131765526325984No Hit
CAAAAAAACAACCTTCTCTCAATAAAAAAAAACAAAAACACCTAACGCTA21780.8438262756189221No Hit
CAAAACAAACAACACTAAAACCAAACTAATAAAAAACAAATCCCGCATCG21360.8275541435821937No Hit
CCAACATATACAAACACAAAATACTCAACAACTACCTACACAAACAAACC20560.7965596063693774No Hit
ACTCCCACACACACTAACACAATAAAACGACGCTACGAACATCAATACAC20290.786098950060052No Hit
CAAAACAAACAACACTAAAACCAAACTAATAAAAAACAAATCCCACATCG19510.755879276277556No Hit
ACCCCCAAAAAAACCTACTCATAAACACTTAAAACCCCCACCACCCGCAA17930.6946650652822439No Hit
ACTCCCACACACACTAACACAATAAAACAACGCTACGAACATCAATACAC17560.6803300918213165No Hit
ACTCCCACACACACTAACACAATAAAACAACACTACGAACATCAATACAC16400.6353880128627329No Hit
TCTTTCCTCTTACCCAACACTTTATAAATAAATAATCACCAAAACCGCAC16050.6218279028321259No Hit
TACCACCTAAATCTCCAACTTCTCCGAAAAAACCAACTATCCTAATAAAA16020.6206656076866452No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCGTTTTAAAAAAAAAACAACAT15520.6012940219286351No Hit
TACCACCTAAATCTCCAACTTCTCCAAAAAAACCAACTATCCTAATAAAA14950.5792104141645036No Hit
CAACTACCAAACCCTAAAAAACCACTCTACGCTAACCAAAACCCAAAAAA13950.5404672426484832No Hit
AACCACTCACCTACTTAATCTCCCGATTCCAATATATCCAAAACTTACCC13540.5245825423269149No Hit
TCCAACCAATAACACTATCTCTAACCTCGATTTCCTCATCCGTCCTATAA13510.5234202471814343No Hit
CAACCATAAATACACAAAAAACAACCTATACCACTACTAAATACACAACC11580.4486459261555151No Hit
CAAAACAAACAACACTAAAACCAAACTAATAAAAAACAAATCCCGCATCA11190.4335360892642671No Hit
CCCAAAAATTAATAAATAAACCCCAAAAACTAAAAAATAAACGCCAAAAA11140.43159893068846616No Hit
CACCCAAAATACCTCAACTACCTTACTCTAAACTAACCCCGTTAACTCCC10960.42462515981558246No Hit
CCCCTAATAAAAACTTCCTTCCACTAACCGCAAACATTAAAACCTTCATC9780.3789082174266786No Hit
ACTCCCACACACACTAACACAATAAAACGACACTACGAACATCAATACAC9200.3564371779473868No Hit
ACTCTAAAAAACCAACTCCTCCAAACGAAAACTCCTAAAACCTCAACGAA8670.33590329704389604No Hit
CCCATAAACACCCTATAAACTAACATCACTAAACACGACTTAACTATATC8520.33009182131649295No Hit
TAAAACTAAACCCCACATACCTTCCCCAACCCAAACACAACACTAACACA7110.27546394947890435No Hit
ACCCCCAAAAAAACCTACTCATAAACGCTTAAAACCCCCACCACCCACAA7030.2723644957576227No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCATTTTAAAAAAAAAACAACAT6610.2560923637208942No Hit
AAAAATCCTAAAAACCCCAAAACTACGAACTAACAAAAAAAATAATCACA6560.2541552051450932No Hit
CCCATAAACACCCTATAAACTAACATCACTAAACACAACTTAACTATATC6210.24059509511448607No Hit
AAAACCCCACTCTATCTTACAACCTAAATTCAAAACCCAAACACCTCCAT6110.23672077796288404No Hit
TAAACACCAAACCCAAAAAAATAAAAAAAAAACCTACCGCCAAAAAAACC5960.23090930223548098No Hit
ACTCTAAAAAACCAACTCCTCCAAACGAAAACTCCTAAAACCTCAACAAA5800.22471039479291774No Hit
CACCCAAAATACCTCAACTACCTTACTCTAAACTAACCCCATTAACTCCC5450.21115028476231065No Hit
CCTAAAAAAACAACACTCCAAACACATATACCCGAACCCTAAATCCCACC5090.19720274301654336No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCGTTTTAAAAAAAAACAACATT5070.19642787958622293No Hit
CCCCTAATAAAAACTTCCTTCCACTAACCGCGAACATTAAAACCTTCATC4890.1894541087133393No Hit
AAACACAAACCTATCTCTTATCCCCTACACCCAAAAAAAAAAACAACACA4790.18557979156173723No Hit
CCTAAAAAAACAACACTCCAAACACATATACCCAAACCCTAAATCCCGCC4750.18403006470109642No Hit
CAAAACAAACAACACTAAAACCAAACTAATAAAAAACAAACCCCGCATCG4740.18364263298593622No Hit
AAACTACAAAATCAAAACCAACCCCATACAACTCCCTAATACCTTGTAGA4540.17589399868273217No Hit
CCATAAAAACAAAAACCTAAAAAAACTAAAACACCTATTAACCTATCCCG4360.1689202278098485No Hit
AATACCTAAAAACCCAAAACCCTTCAAAAAATCTACCCAACATAAAAAAA4280.16582077408856688No Hit
AAACACAAACCTATCTCTTATCCCCTACGCCCGAAAAAAAAAACGACACA4210.1631087520824455No Hit
CATAACACAAACACAAAAAACCAACCAAAAAAAATCCTATAACTCTAAAA4090.15845957150052303No Hit
AAACACAAACCTATCTCTTATCCCCTACACCCAAAAAAAAAACAACACAA4090.15845957150052303No Hit
CCCCTAATAAAAACTTCCTTCCACTAACCACAAACATCAAAACCTTCATC4040.15652241292472202No Hit
AAAACCCCACTCTATCTTACAACCTAAATTCAAAACCCAAACGCCTCCAT4000.1549726860640812No Hit
CAAAAAAACAACCTTCTCTCAATAAAAAAAAAACAAAAACACCTAACGCT3900.1510983689124792No Hit
AAACTACAAAATCAAAACCAACCCAAAACCACACCAAACCCCCGCAAAAC3800.14722405176087716No Hit
CAACTACCAAACCCTAAAAAACCACCATACTACTCTCTACTTCTATAAAT3730.14451202975475572No Hit
TAAACACCAAACCCAAAAAAATAAAAAAAAAACCTACCACCAAAAAAACC3730.14451202975475572No Hit
TCCAACCAATAACACTATCTCTAACCTCGACTTCCTCATCTATCCTATAA3650.1414125760334741No Hit
CAAAAAAACAACCTTCTCTCAATAAAAAAAACAAAAACACCTAACGCTAA3590.13908798574251288No Hit
TAAAACTAAACCCCACATACCTTCCTCCAAATATAAAACCACCAAACACT3430.13288907829994964No Hit
CCCCTAATAAAAACTTCCTTCCACTAACCACGAACATTAAAACCTTCATC3250.12591530742706597No Hit
AAAACCCCACTCTATCTTACAACCTAAATTCGAAACCCAAACGCCTCCAT3220.12475301228158538No Hit
CCTAAAAAAACAACACTCCAAACACGTATACCCGAACCCTAAATCCCGCC3210.12436558056642516No Hit
AAAAAAATCCTTCCAACCAATAAAAACAATAACTAACCAAATAAATAACT3120.12087869512998335No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCGTTTTAAAAAAAAAAACAACA3110.12049126341482314No Hit
TAAACACCAAACCCAAAAAAATAAAAAAAAACCTACCGCCAAAAAAACCC3060.11855410483902214No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCATTTTAAAAAAAAACAACATT2740.10615628995389562No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)