FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888164

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888164
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91229
Sequences flagged as poor quality0
Sequence length151
%GC33

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGTT1786919.58697344046301No Hit
GTAAGGTTTGGGGTTATTTTAGTGGAGTCGGAGGTGTTACGTTTTGTTGT1383115.1607493231319No Hit
AAAGATAATAAATTGGGTATTGTTGAAATGTAATTAATTAAATAGTTTTT1231513.498997029453353No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTG62256.823488145216981No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGCGTTAGGTT60116.588913612995867No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGACGGTGTTTGTAGTGATAGGGTTG53255.836959738679587No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGTGTTAGGTT49485.423713950607811No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGAGTGGTTGGGTAGA36353.9844786197371453No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGTGTTAGGTT1420.1556522596981223No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGCGTTAGGTT1410.15455611702419186No Hit
GTTTTATTGGGTTAATGAGAAGGGCGGTCGGTAGGGTTGAGCGTTAGGTT1400.15345997435026143No Hit
GTTTTATTGGGTTAATGAGAAGGGCGGTTGGTAGGGTTGAGTGTTAGGTT1370.15017154632847013No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGTGTGGTTGGGTAGA1160.12715255017593088No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGTTAGTT970.10632583937125256No Hit
GTAAGGTTTGGGGTTATTTAGTGGAGTCGGAGGTGTTACGTTTTGTTGTT950.10413355402339168No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)