FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000888167

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888167
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140018
Sequences flagged as poor quality0
Sequence length151
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAAAAAAACCAACAAAAAAACTAAATAAAACCGAAAACTTCTCCATCTT1637711.696353326000942No Hit
AAATTACAAAAATAAACTAAAATCCCAACACATCAAAAATACAATAATAC136179.725178191375395No Hit
CACACACACAAAACTATAATAAATACCCTAAAAAACACTCCGTAAAATTC134029.571626505163621No Hit
ACCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCT114648.187518747589595No Hit
CTATTAACCCCCTCCCTAAACAATCACCGTTTATATTATTTATTTCCTAA99757.1240840463368995No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACATCTAAAA60464.318016255052922No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACGTCTAAAA58304.163750374951792No Hit
ACTCAAACTAATACACCACTACATACCGCCCCCTAAAACCCCCTCCTTCC44293.163164735962519No Hit
AAAAACTAACACACACTTATACCCCCGAAACAACCATAAATACACAAAAA38022.7153651673356283No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAACTCTAAAAATAAAAAAAAAAT35442.531103143881501No Hit
ACCCCACTCCAACTATCCAAAAAAAAAACTCTAAAAATAAAAAAAAAATA17611.2576954391578226No Hit
ACCAAACAACCAAACTAAACAACGCTAAAAACAAAAAACCCAAATATCCT14351.0248682312274136No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAACTCTAAAAATAAAAAAAAATA11800.8427487894413576No Hit
ACCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCC11540.8241797483180734No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAAACTCTAAAAATAAAAAAAAAA11350.8106100644202888No Hit
ACTCAAACTAATACACCACTACATACCACCCCCTAAAACCCCCTCCTTCC10420.7441900327100802No Hit
CTATTAACCCCCTCCCTAAACAATCACCATTTATATTATTTATTTCCTAA10160.725620991586796No Hit
CCCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCT9300.6642003171020869No Hit
AAAAACTAACACACACTTATACCCCCAAAACAACCATAAATACACAAAAA9280.6627719293233727No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAACTCTAAAAATAAAAAAAAAAA7710.5506434886943108No Hit
ACCAAACAACCAAACTAAACAACACTAAAAACGAAAAACCCAAATATCCT6350.4535131197417475No Hit
ACCCCACTCCAACTATCCAAAAAAAAAACTCTAAAAATAAAAAAAAATAA5950.42494536416746415No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACGCCTAAAA5040.35995372023596967No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAGCGTCTAAAA4670.3335285463297576No Hit
CAATTACAAAAATAAACTAAAATCCCAACACATCAAAAATACAATAATAC4540.3242440257681155No Hit
ACCCCACTCCAACTATCCAAAAAAAAACTCTAAAAATAAAAAAAAAATAA4200.2999614335299747No Hit
CCCCCACTCCAACTATCCAAAAAAAAAAACTCTAAAAATAAAAAAAAAAT3230.2306846262623377No Hit
CCTCAAACTAATACACCACTACATACCGCCCCCTAAAACCCCCTCCTTCC3160.2256852690368381No Hit
CCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACATCTAAAA3070.21925752403262438No Hit
CCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACGTCTAAAA3060.21854333014326727No Hit
ACCCCACTCCAACTATCCAAAAAAAAAACTCTAAAAATAAAAAAAAAAAT2820.2014026767986973No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAAACTCTAAAAATAAAAAAAAAT2820.2014026767986973No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAAAACTCTAAAAATAAAAAAAAA2690.19211815623705525No Hit
CCAAAAAACCAACAAAAAAACTAAATAAAACCGAAAACTTCTCCATCTTA2200.15712265565855818No Hit
CCAAAAAAACCAACAAAAAACTAAATAAAACCGAAAACTTCTCCATCTTA2020.1442671656501307No Hit
CCCCCACTCCAACTATCCAAAAAAAAAACTCTAAAAATAAAAAAAAAATA1670.1192703795226328No Hit
ACCCCACTCCAACTATCCAAAAAAAAACTCTAAAAATAAAAAAAAATAAA1630.11641360396520448No Hit
CACACACACAAAACTATAATAAATACCCTAAAAACACTCCGTAAAATTCA1610.1149852161864903No Hit
CAAAACTAACACACACTTATACCCCCGAAACAACCATAAATACACAAAAA1420.10141553228870574No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)