FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888180

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888180
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90209
Sequences flagged as poor quality0
Sequence length151
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAATTGTTTTTGGGAATTTGTAGCGTTGGTTTCGTTAAGTCGGTTGGAA1492616.546020907004845No Hit
AAAGATAATAAATTGGGTATTGTTGAAATGTAATTAATTAAATAGTTTTT1300614.417630169938697No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTG1119512.410069948674744No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTATT81008.979148421997806No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGTT51175.672383021649725No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGAGTGGTTGGGTAGA50805.631367158487512No Hit
ATTATTTTTTTAGGGAGTTGGGTTGTATTTTATTTGTTGTTTTGTTTTTA33553.7191411056546464No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGTGTTAGGTT26352.9209945792548417No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGCCGGTAGGGTTGAGCGTTAGGTT19702.1838175791772443No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGTGTTAGGTT18852.0895919475883784No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTATTT8370.9278453369397732No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTTAT4570.5066013368954317No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGAGTGGTTGGGTAGG2000.22170736844439026No Hit
GTGTTTGGAGTGTTGTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTGG1830.20286224212661708No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTCTTTAGATAGTT1680.1862341894932878No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGCT1630.18069150528217803No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGTGTGGTTGGGTAGA1590.17625735791329025No Hit
GGAATTGTTTTTGGGAATTTGTGGCGTTGGTTTCGTTAAGTCGGTTGGAA1300.14410978948885367No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGCGTTAGGTT1210.1341329579088561No Hit
ATTATTTTTTTAGGGAGATGGGTTGTATTTTATTTGTTGTTTTGTTTTTA1070.11861344211774878No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)