FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000888184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111589
Sequences flagged as poor quality0
Sequence length151
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAATTGTTTTTGGGAATTTGTAGCGTTGGTTTCGTTAAGTCGGTTGGAA1401112.555897086630402No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTATT1287411.536979451379615No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGTT1266211.346996567762055No Hit
GTAAGGTTTGGGGTTATTTTAGTGGAGTCGGAGGTGTTACGTTTTGTTGT1138010.198137809282278No Hit
AAAGATAATAAATTGGGTATTGTTGAAATGTAATTAATTAAATAGTTTTT101069.05644821622203No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTG91028.156717956070938No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGAGTGGTTGGGTAGA43923.935871815322299No Hit
ATTATTTTTTTAGGGAGTTGGGTTGTATTTTATTTGTTGTTTTGTTTTTA31402.81389742716576No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGCGTTAGGTT30812.761024832196722No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGCGTTAGGTT20861.8693598831426037No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTATTT13501.2097966645457885No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGACGGTGTTTGTAGCGATAGGGTTG9720.8710535984729678No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTTAT8180.7330471641470038No Hit
AAAGATAATAAATTGGGTATTGTTGAAATGTAATTAGTTAAATAGTTTTT5900.5287259496903817No Hit
GTAAGGTTTGGGGTTATTTTAGTGGAGTTGGAGGTGTTACGTTTTGTTGT4810.43104607084927726No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGCCGGTAGGGTTGAGCGTTAGGTT4440.3978886807839482No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGTGTTAGGTT3610.3235085895563183No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGTGTTAGGTT3440.3082741130398158No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGCATTAGGTT1530.1371102886485227No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGTGTGGTTGGGTAGA1460.13083726890643343No Hit
GTGTTTGGAGTGTTGTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTGG1320.11829122942225488No Hit
GGAATTGTTTTTGGGAATTTGTGGCGTTGGTTTCGTTAAGTCGGTTGGAA1270.11381050103504825No Hit
GTTTTATTGGGTTAATGAGAAGGGATTGTTTAGGGAGGGGGTTAATAGAG1270.11381050103504825No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)