FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000888189

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888189
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128484
Sequences flagged as poor quality0
Sequence length151
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAAAAAAACCAACAAAAAAACTAAATAAAACCGAAAACTTCTCCATCTT1556812.11668378942125No Hit
CACACACACAAAACTATAATAAATACCCTAAAAAACACTCCGTAAAATTC1534411.942343015472744No Hit
ACCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCT1345610.472899349335325No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACGTCTAAAA109108.491329659724169No Hit
AAATTACAAAAATAAACTAAAATCCCAACACATCAAAAATACAATAATAC100997.860122661187385No Hit
CTATTAACCCCCTCCCTAAACAATCACCGTTTATATTATTTATTTCCTAA56404.389651629774914No Hit
AAAAACTAACACACACTTATACCCCCGAAACAACCATAAATACACAAAAA39943.108558264064008No Hit
ACTCAAACTAATACACCACTACATACCGCCCCCTAAAACCCCCTCCTTCC30802.397185641791974No Hit
CTATTAACCCCCTCCCTAAACAATCACCATTTATATTATTTATTTCCTAA26662.074966532797858No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAACTCTAAAAATAAAAAAAAAAT23191.8048939945829832No Hit
AAATTACAAAAATAAACTAAAATCCCAACGCATCAAAAATACAATAATAC20071.5620622022975623No Hit
CCAAAAAAACCAACAAAAAAACTAAATAAAACCGAAAACTTCTCCATCCT19931.5511659039257806No Hit
ACTCAAACTAATACACCACTACATACCACCCCCTAAAACCCCCTCCTTCC17831.387721428349055No Hit
ACCCCACTCCAACTATCCAAAAAAAAAACTCTAAAAATAAAAAAAAAATA13101.0195822047881449No Hit
CCCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCT9870.7681890352106099No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAACTCTAAAAATAAAAAAAAATA8890.6919149466081379No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAAACTCTAAAAATAAAAAAAAAA7480.5821736558637651No Hit
CCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACGTCTAAAA6400.49811649699573485No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAACTCTAAAAATAAAAAAAAAAA5760.44830484729616144No Hit
ACCCCACTCCAACTATCCAAAAAAAAAACTCTAAAAATAAAAAAAAATAA5110.3977148905700321No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAACTCTAAAAATAAAAAAAAAAC3440.2677376171352075No Hit
CTATTAACCCCCTCCCTAAACAATCACCGTTTATATTATTTATTTCCTGA3130.24361009931197658No Hit
ACCCCACTCCAACTATCCAAAAAAAAACTCTAAAAATAAAAAAAAAATAA3060.2381619501260857No Hit
CAATTACAAAAATAAACTAAAATCCCAACACATCAAAAATACAATAATAC2740.213256125276299No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAAACTCTAAAAATAAAAAAAAAT2680.20858628311696395No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACTTCTAAAA2640.20547305501074065No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAACTCTAAAAATAAAAAAAAACA2540.1976899847451823No Hit
CACACACACAAAACTATAATAAATACCCTAAAAACACTCCGTAAAATTCA2440.18990691447962393No Hit
CCTCAAACTAATACACCACTACATACCGCCCCCTAAAACCCCCTCCTTCC2220.17278415989539553No Hit
ACCCCACTCCAACTATCCAAAAAAAAAACTCTAAAAATAAAAAAAAAACA2090.1626661685501697No Hit
ACCCCACTCCAACTATCCAAAAAAAAAACTCTAAAAATAAAAAAAAAAAT2050.15955294044394633No Hit
CCAAAAAAACCAACAAAAAACTAAATAAAACCGAAAACTTCTCCATCTTA2050.15955294044394633No Hit
CCCCCACTCCAACTATCCAAAAAAAAAAACTCTAAAAATAAAAAAAAAAT2030.15799632639083466No Hit
ACCCCACTCCAACTATCCAAAAAAAAAAAAACTCTAAAAATAAAAAAAAA1910.1486566420721646No Hit
CCAAAAAACCAACAAAAAAACTAAATAAAACCGAAAACTTCTCCATCTTA1840.14320849288627377No Hit
CTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACGTCTAAAAA1790.1393169577534946No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACATCTAAAA1640.12764235235515706No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAATTAAACAAAACGTCTAAAAA1640.12764235235515706No Hit
CTATTAACCCCCTCCCTAAACAATCCCTTCTCATTAACCCAATAAAACTG1530.11908097506304285No Hit
ACCCCACTCCAACTATCCAAAAAAAAAACTCTAAAAATAAAAAAAAACAA1440.11207621182404036No Hit
CAAAACTAACACACACTTATACCCCCGAAACAACCATAAATACACAAAAA1440.11207621182404036No Hit
CACACACACAAAACTATAATAAATACCTTAAAAAACACTCCGTAAAATTC1360.10584975561159365No Hit
GCCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCT1310.10195822047881448No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)