FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000888194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108056
Sequences flagged as poor quality0
Sequence length151
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAATTGTTTTTGGGAATTTGTAGCGTTGGTTTCGTTAAGTCGGTTGGAA1345612.45280225068483No Hit
AAAGATAATAAATTGGGTATTGTTGAAATGTAATTAATTAAATAGTTTTT1140610.555637817428No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGTT1135510.50844006811283No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTATT95748.860220626341897No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTG93938.692714888576294No Hit
GTAAGGTTTGGGGTTATTTTAGTGGAGTCGGAGGTGTTACGTTTTGTTGT91718.487265862145554No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGAGTGGTTGGGTAGA50274.652217368771748No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGCCGGTAGGGTTGAGCGTTAGGTT44314.100651514029762No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGCGTTAGGTT39633.667542755608203No Hit
ATTATTTTTTTAGGGAGTTGGGTTGTATTTTATTTGTTGTTTTGTTTTTA31612.925335011475531No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTATTT12091.118864292589028No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTTAT5770.5339823795069224No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGACGGTGTTTGTAGTGATAGGGTTG3910.36184941141630267No Hit
TGGGGAGGGAAGAGTAGATTTTATGATATTTTTGGGGTTTTTAGATAGTT3410.3155771081661361No Hit
AAAGATAATAAATTGGGTATTGTTGAAACGTAATTAATTAAATAGTTTTT3350.3100244317761161No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGACGGCGTTTGTAGCGATAGGGTCG2970.27485748130598947No Hit
GGGAGATTAAGTAGGTGAGTGGTTTTTTTGTTAGTTTTTTTGTTGGTTTT2890.2674539127859628No Hit
GTGTTTGGAGTGTTGTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTGG1410.13048789516546974No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGTGTGGTTGGGTAGA1310.12123343451543643No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTTTT1280.11845709632042645No Hit
AAAGATAATAAATTGGGTATTGTTGAAATGTAACTAATTAAATAGTTTTT1250.11568075812541645No Hit
GTAAGGTTTGGGGTTATTTTAGTGGAGTCGGAGGTGTTACGTTCTGTTGT1200.1110535278003998No Hit
GGAATTGTTTTTGGGAATTTGTGGCGTTGGTTTCGTTAAGTCGGTTGGAA1180.10920263567039312No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)