FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888198

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888198
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89791
Sequences flagged as poor quality0
Sequence length151
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTATT1475416.431490906661022No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGTT1424115.860164158991436No Hit
GTAAGGTTTGGGGTTATTTTAGTGGAGTCGGAGGTGTTACGTTTTGTTGT1251513.937922508937422No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTG1083012.06134245080242No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGCGTTAGGTT89799.999888630263612No Hit
ATTATTTTTTTAGGGAGTTGGGTTGTATTTTATTTGTTGTTTTGTTTTTA37004.120680246349857No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTATTT17401.937833413148311No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGAGTGGTTGGGTAGA16061.7885979663886138No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTTAT8230.9165729304718736No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTGTT3000.3341092091635019No Hit
GTTTTATTGGGTTAATGAGAAGGGCGGTTGGTAGGGTTGAGCGTTAGGTT2550.2839928277889766No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGCTTTTTTTTATT2400.26728736733080155No Hit
GTGTTTGGAGTGTTGTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTGG1550.17262309140114265No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTTTT1240.1380984731209141No Hit
ATTATTTTTTAGGGAGTTGGGTTGTATTTTATTTGTTGTTTTGTTTTTAT1010.11248343375171231No Hit
GTTTTATTGGGTTAATGAGTAGGGAGGTTGGTAGGGTTGAGCGTTAGGTT990.11025603902395562No Hit
ATTATTTTTTTAGGGAGATGGGTTGTATTTTATTTGTTGTTTTGTTTTTA980.1091423416600773No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)