FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000888204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences174478
Sequences flagged as poor quality0
Sequence length151
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAATTGTTTTTGGGAATTTGTAGCGTTGGTTTCGTTAAGTCGGTTGGAA2275613.042331984548195No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTATT2244212.8623666020931No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGTT2042911.708639484634165No Hit
AAAGATAATAAATTGGGTATTGTTGAAATGTAATTAATTAAATAGTTTTT1932911.07818750788065No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTG1763410.10671832551955No Hit
GTAAGGTTTGGGGTTATTTTAGTGGAGTCGGAGGTGTTACGTTTTGTTGT165149.464803585552334No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGAGTGGTTGGGTAGA74434.2658673299785645No Hit
ATTATTTTTTTAGGGAGTTGGGTTGTATTTTATTTGTTGTTTTGTTTTTA46932.689737388094774No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTATTT27891.598482330150506No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTTAT14730.8442325106890266No Hit
GTTTTATTGGGTTAATGAGAAGGGATGTTGGTAGGGTTGAGTGTTAGGTT10780.6178429372184459No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGTGTTAGGTT8790.503788443242128No Hit
ATTATTTTTTTAGGGAGTTGGGTTGTATTTTATTTGTCGTTTTGTTTTTA3720.21320739577482548No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGTGTTAGGTT3640.20862229048934536No Hit
GTGTTTGGAGTGTTGTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTGG2840.16277123763454418No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGCGTTAGGTT2680.15360102706358394No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGTGTGGTTGGGTAGA2660.15245475074221393No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTTTT1910.10946938869083782No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)