FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000888206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137598
Sequences flagged as poor quality0
Sequence length151
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAATTGTTTTTGGGAATTTGTAGCGTTGGTTTCGTTAAGTCGGTTGGAA1806913.131731565865785No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGTT1679312.204392505705025No Hit
AAAGATAATAAATTGGGTATTGTTGAAATGTAATTAATTAAATAGTTTTT1464310.641869794619108No Hit
GTAAGGTTTGGGGTTATTTTAGTGGAGTCGGAGGTGTTACGTTTTGTTGT133769.721071527202431No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTG125259.102603235512143No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTATT113398.240672102792193No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGAGTGGTTGGGTAGA68404.971002485501243No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGCGTTAGGTT50013.6345005014607774No Hit
ATTATTTTTTTAGGGAGTTGGGTTGTATTTTATTTGTTGTTTTGTTTTTA34122.479687204755883No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGATGGCGTTTGTAGTGATAGGGTTG13100.9520487216383958No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTATTT12040.8750127182081134No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTTAT7100.5159958720330238No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGTGTTAGGTT6680.4854721725606477No Hit
ATTATTTTTTTAGGGAGTTGGGTTGCATTTTATTTGTTGTTTTGTTTTTA6470.4702103228244597No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGTGTTAGGTT5520.4011686216369424No Hit
AAAGATAATAAATTGGGTATTGTTGAAATGTAATTAATTAGATAGTTTTT5310.3859067719007544No Hit
GTAAGGTTTGGGGTTATTTTAGTGGGGTCGGAGGTGTTACGTTTTGTTGT2790.20276457506649806No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGTGTGGTTGGGTAGA2200.1598860448553031No Hit
GGAATTGTTTTTGGGAATTTGTAGCGTTGGTTTCGTTAAGCCGGTTGGAA2170.15770578060727627No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGCGTTAGGCT2160.15697902585793397No Hit
TGGGGAGGGAAGAGTAGATTTTATGATATTTTTGGGGTTTTTAGATAGTT1980.1438974403697728No Hit
GTGTTTGGAGTGTTGTTTTTTAGGGATGGTGTTTGTAGTGATAGGGTTGG1740.12645532638555793No Hit
GGAATTGTTTTTGGGAATTTGTAGCGTTGGTCTCGTTAAGTCGGTTGGAA1650.11991453364147735No Hit
GGAATTGTTTTTGGGAATTTGTGGCGTTGGTTTCGTTAAGTCGGTTGGAA1450.1053794386546316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)